CDS

Accession Number TCMCG051C41215
gbkey CDS
Protein Id XP_002321626.3
Location complement(join(2037828..2037905,2038905..2039196,2040230..2040411,2040649..2041551,2041630..2041716,2042332..2042415,2042523..2042576,2042762..2042896,2043061..2043156,2044505..2044774,2045827..2045916,2047112..2047171,2047522..2047588,2047748..2047839,2048251..2048352))
Gene LOC7457766
GeneID 7457766
Organism Populus trichocarpa

Protein

Length 863aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002321590.3
Definition nuclear pore complex protein NUP93A isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category D
Description Nuclear pore protein
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14309        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046931        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051292        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAAGCGAACAGGACATGAGTAACTGGACCGATCTACTCCACTCCTCCACCAAACTTCTCGAACAAGCTGCTCCTTCCCCTCAATTCCCTCCTCTTCAGAGAAACTTAGATCAATTAGAAGCATTATCGAAGAAACTCAAGGCTAAAGCCATAAGACCCGAGGCTCCTTCGCAATCTATTGCTGCTACAAGGCTTCTTGCACGTGAAGGAATAAATGCCGAGCATCTTGCACGAGATCTAAAGTCTTTTGAATTGAAGACAACATTTGAGGATGTGTTTCCTGCCGAGGCTACAAGTGTTGAAGAGTATCTTCAACAGTTTCATGAAATGGCAATGGTATCAGCAATCCAGGAAGCTCAGAAGGATAACGTAAGAAGTTTTAATGATTACATGATGAGAGTTTTGGAGGAGGATTGGCAAAAGGAAAGATGTGACTTTCTTCAGAGCTTGAGCCGAATTTCATCATTGCCCAGGACTAACATAGTCGATTCAAGTACTGGAGGTACTCGTTCTGGTCAACTAGCTTCTCTGGCTTCCAGCCCTCATGCTTCTTCTGGTCCATCTGGCATGGAAATTGTACCTTTAGCTAACAAACCCATTCTGGAGAAAAAAGCTTCGGCGTGTGCTGAGGTTGTGAAGAATTTGAACCATGCGCGAGAGCATGGCTCACAATTCAAGCCTGCAACAGCTTTCAAAGGTGCTTATGAAAGCTTAGGTGTTGAAGTATCTGGTGGAAAATCTGTTAACATGCAAAAGATATGGCACCTTGTTCAGACATTGGTGGGTGAAAATACAACCATGCAACCGATCGTTTCAAGAAAAATGTCATTAGTTATTGGTGCAAGGCGCCATCTTGAATGGGGCCATGAAAAATACATCATGGATACAATACAAAATCATCCAGCACAGGCTGCTCTTGGTGGAGCTGTTGGGAATCTACAAAGAGTTCATGCATTTCTTCGGATTCGGTTAAGGGATTATGGAGTTCTGGATTTTGATGCAGGTGATACTCATAGGCAGCCTCCAGTTGATACCACTTGGCAGCAGATCTATATTTGCTTGAGAACTGGGTATTATGAGGAAGCAAGAACTGTTGCCCTGTCTTCCCGTGCTTCACACCAATTTGCTCCTATGCTCATGGAGTGGATTAACTCTGGAGGTATGGTGCCTGCGGATATTGCAGCTGCTGCTTCAGAAGAATGTGAAAAAATGTTAAGAATGGGTGATCGGGTGGGTCGAGCTGCATATGACAAGAAAAAGTTGTTGCTCTATGCTATAGTATCTGGTTCTCGCAGGCAAATTGACCACCTGCTGAGAGATCTGCCAACCCTTTTCAATACTATAGAGGATTTCCTGTGGTTCAAATTATCAGCTGTACAAGAGTACCATGGTGGGACCTCATCTCAGGTCCTGAATGAAAGCTTGGTACCATACAGTTTGGAGGATTTGCAGGCATACTTGAATAAATTTGAACCATCATATTATACTAAAAATGGGAAAGACCCTCTCGTATACCCTTATGTGTTACTATTAAGCGTCCAGATGCTACCAGCTATCTTATATTTGTCTAAGGAAGCTGCAGATGATGGATACAATATCAACGCAGTCCATGTATCAATTGCACTAGCAGACCATGGGGTTCTTACTGAAGGTGCTGGAGCTGGGCAAAAACTTGGGGTAATGGATGCTTATGCAGAGGTCGCTAGCATAATTAGGCAGTATGGATCTGCATATTTACGTCATGGAAATCTCTCAATGGCACTAGAATATTATGCCCAAGCTGCAGCTACAGTAGGTGGTGGAGAAGCATCATGGACTGGGAGAGGTAATATTGATCAGCAGAGGCAGAGAAGCATGATGTTGAAGCAACTCCTCACTGAGCTATTGCTAAGGGATGGTGGTATTCATCTTTTACTGGGTCCAAGAGGTGCCGGAGAAGAAGGTGAATTGGCACGATTTTTGACTGATTCTAAAGAAAGACAGCAATTTCTACTTGAAGCTGCTCGCAAGTGTCAAGAAGCTGGACTAGATGAAAAGTCCATAGAAATTCAGAAGAGAGTTGGGGCATTCTCTATGGCTTTAGATACAATCAATAAGTGCCTGTCTGAAGCAATTTGTGCACTGTCACGTGGTAGATTGGATGGTGAGAGCTGGACTGCTGGTCTCATTAATTCTGGCAATGAGATTCTGGAGACATTTAAGTATTATCCTAATGAAAGTTTTCAAGAAAGAGGTCATGTCATAGAGCAAGAAACAGTATTAAGACAGCTTGAGGCAACATTATCTGTTCACAAGTTGGCGAGAATGGGTCACTATCTTGATGCTTTAAGGGAGCTTGCCAAACTTCCTTTTCTTCCATTTAATCCACGAGTGCCAGATGTCACTGTTGATGCACTTCAGAATTTATCCCTTCATGTTCAGGCTTGTGTGCCATACCTTTTGAAGGTTGCTTTAACATGTTTGGATAATGTGACAGATTCTGATGGGTCACTTCGTGCCATGAGAGCAAAGATTACACAGTTCCTTGCAAATAATATGAATCGGAATTGGCCTCGTGATTTGTATGAGAAGGTTGCTCGAAGTTTGTGA
Protein:  
MASEQDMSNWTDLLHSSTKLLEQAAPSPQFPPLQRNLDQLEALSKKLKAKAIRPEAPSQSIAATRLLAREGINAEHLARDLKSFELKTTFEDVFPAEATSVEEYLQQFHEMAMVSAIQEAQKDNVRSFNDYMMRVLEEDWQKERCDFLQSLSRISSLPRTNIVDSSTGGTRSGQLASLASSPHASSGPSGMEIVPLANKPILEKKASACAEVVKNLNHAREHGSQFKPATAFKGAYESLGVEVSGGKSVNMQKIWHLVQTLVGENTTMQPIVSRKMSLVIGARRHLEWGHEKYIMDTIQNHPAQAALGGAVGNLQRVHAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQIYICLRTGYYEEARTVALSSRASHQFAPMLMEWINSGGMVPADIAAAASEECEKMLRMGDRVGRAAYDKKKLLLYAIVSGSRRQIDHLLRDLPTLFNTIEDFLWFKLSAVQEYHGGTSSQVLNESLVPYSLEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQMLPAILYLSKEAADDGYNINAVHVSIALADHGVLTEGAGAGQKLGVMDAYAEVASIIRQYGSAYLRHGNLSMALEYYAQAAATVGGGEASWTGRGNIDQQRQRSMMLKQLLTELLLRDGGIHLLLGPRGAGEEGELARFLTDSKERQQFLLEAARKCQEAGLDEKSIEIQKRVGAFSMALDTINKCLSEAICALSRGRLDGESWTAGLINSGNEILETFKYYPNESFQERGHVIEQETVLRQLEATLSVHKLARMGHYLDALRELAKLPFLPFNPRVPDVTVDALQNLSLHVQACVPYLLKVALTCLDNVTDSDGSLRAMRAKITQFLANNMNRNWPRDLYEKVARSL